BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028C06LP1|AL428872
(867 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1687 0.0
>3x_Contig1503
Length = 10719
Score = 1687 bits (849), Expect = 0.0
Identities = 862/867 (99%), Gaps = 1/867 (0%)
Strand = Plus / Minus
Query: 1 atatatagtaatattataactgtaattcattcttccccgacaaatactattcatgctagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5117 atatatagtaatattataactgtaattcattcttccccgacaaatactattcatgctagt 5058
Query: 61 gaatatacatgtacatggctaaaatggtgccgtttcttaacattttatggttctcattat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5057 gaatatacatgtacatggctaaaatggtgccgtttcttaacattttatggttctcattat 4998
Query: 121 gtgagaatttgtgatatgatgagtagtaaaatgcaagagggaacgctgagaataatttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4997 gtgagaatttgtgatatgatgagtagtaaaatgcaagagggaacgctgagaataatttat 4938
Query: 181 caggaaaaatggcgtaagaagtttcccgataaatgaaatacttgggagahagtagtgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 4937 caggaaaaatggcgtaagaagtttcccgataaatgaaatacttgggagaaagtagtgaat 4878
Query: 241 actgtaattcataaatgatttcttgattaagaaaggtaacgcttttatgcaatggaacac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4877 actgtaattcataaatgatttcttgattaagaaaggtaacgcttttatgcaatggaacac 4818
Query: 301 aacacttcaagttaatttatggattttttttttctttgagtctttattgtagggaaatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4817 aacacttcaagttaatttatggattttttttttctttgagtctttattgtagggaaatgg 4758
Query: 361 aatatatatatctggtcccctaattgatgaagtattcttcataaagaaggagaagtttcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4757 aatatatatatctggtcccctaattgatgaagtattcttcataaagaaggagaagtttcg 4698
Query: 421 taatggtttaaccagttttcatatgaatatttttmgatttctaamacagccttcttgaac 480
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 4697 taatggtttaaccagttttcatatgaatatttttagatttctaaaacagccttcttgaac 4638
Query: 481 tgatccacttcatcataacagttcaacggtttttctttgttcttcaatagacattccgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4637 tgatccacttcatcataacagttcaacggtttttctttgttcttcaatagacattccgtt 4578
Query: 541 aaagtcttcttcgtagcagttactttatctgtagatttggccttatgagcctcttgtaat 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4577 aaagtcttcttcgtagcagtaactttatctgtagatttggccttatgagcctcttgtaat 4518
Query: 601 ttcgacaaacggaccttcaattggtctaccttttcatttactagctttgtggaaagtgca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4517 ttcgacaaacggaccttcaattggtctaccttttcatttactagctttgtggaaagtgca 4458
Query: 661 tcacctgcgcgacttggaatcatcgggcaggatagaagactgcaattttgtttcgaattc 720
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 tcacctgcg-gacttggaatcatcgggcaggatagaagactgcaattttgtttcgaattc 4399
Query: 721 ttttaaggcctccgattccaaatcagacaatttcgcagagaccttttcctgtaagtatct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4398 ttttaaggcctccgattccaaatcagacaatttcgcagagaccttttcctgtaagtatct 4339
Query: 781 ttctgccttttgagacctaatgaagtccgattcagttgaattatcgatctgagcgatcaa 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4338 ttctgccttttgagacctaatgaagtccgattcagttgaattatcgatctgagcgatcaa 4279
Query: 841 tttgctttcgaaattaaccggcgtttc 867
|||||||||||||||||||||||||||
Sbjct: 4278 tttgctttcgaaattaaccggcgtttc 4252
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9046
Number of Sequences: 1807
Number of extensions: 9046
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 867
length of database: 10,358,551
effective HSP length: 16
effective length of query: 851
effective length of database: 10,329,639
effective search space: 8790522789
effective search space used: 8790522789
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)